Featured Software
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Scallops

SCALLOPS (Scalable Library for Optical Pooled Screens) is a comprehensive Python package designed to streamline and scale the analysis of Optical Pooled Screens (OPS) for …

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Cumulus

Cumulus is a series of open-source cloud-based single-cell genomics data analysis workflows written in WDL language. They use Cloud Computing to achieve scalability on large-scale …

Pegasus

Pegasus is a tool for analyzing transcriptomes of millions of single cells. It is a command line tool, a python package and a base for Cloud-based analysis workflows.

Other Software
(2017). PROBer.
(2014). DETONATE.
(2010). RSEM.